YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25011226, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRVYSFLGG IILVILILFG LTTYLEKKSS STPNSDKLVI YNWGDYIDPA LLKKFTKETG  60
   61 IEVQYETFDS NEAMHTKIKQ GGTTYDIAVP SDYMIDKMIK ENLLVKLDHS KIANWDAIGA 120
  121 RFKNLSFDPK NKYSIPYFWG TVGIVYNDQL VKTPPKHWDD LWRPEFRNKI MLVDSAREVI 180
  181 GVGLNSLGYG LNTKNISELK AASKKLDALT PNVKAIVADE MKGYMIQGDA AIGVTFSGEA 240
  241 REMLDGNKHL HYVVPSEGSN LWFDNIVIPK TVKHRKEAYA FINFMMEPKN AAQNAEYIGY 300
  301 ATPNLKAKAL LPADIKNDKA FYPPDKTIDH LEVYNNLGQK WLGIYNDLYL QFKMYRK

Type	Start	End	Confidence
Cytoplasmic	1	6	0.64
Transmembrane Helix	7	25	0.78
Non-Cytoplasmic	26	357	0.98