YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77161613, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVRKAVIPA AGLGTRFLPA TKALAKEMLP IVDKPTIQFI VEEALKSGIE DILVVTGKSK  60
   61 RSIEDHFDSN FELEYNLKEK GKNELLKLVD ETTGIRLHFI RQSHPRGLGD AVLQAKAFVG 120
  121 NEPFVVMLGD DLMDITNNKV IPLTKQLIND FEATHASTIA VMEVPHEDVS AYGVIAPQGE 180
  181 GVNGLYSVNT FVEKPSPEEA PSNLAIIGRY LLTPEIFNIL ETQKPGAGNE IQLTDAIDTL 240
  241 NKTQRVFARK FTGDRYDVGD KFGFMKTSID YALQHPQVKD DLKKYIIDLG KSLEKTSKK

Type	Start	End	Confidence
Signal Peptide	1	25	0.90
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	299	0.99