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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21109934, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRLIGPHRS CLAVQLSLCL IPTLAWAQQP EAAPSTRTLD SVQVTGTRIK TAELQGQVPI  60
   61 QTLNRADIER TGLTSIGEVL QELTASGSAL NAKFNSSGNF GFPPDGSGVG AGSAQVDLRH 120
  121 LGSKRVLVLV DGIRWVNESS ASGVGSSTDL NTIPLAIVER IEVLEDGASS LYGSDAIAGV 180
  181 VNIITRRSFD GAQVTLNYGQ YGKGDGTNQG MDLAWGTSGE NFSLFLGASY VKQDPIYARD 240
  241 RAQARFPIPG TGLTFASSAT PDGRFQFVDP NTGVRQNLTP NAGVGTPQYD GSGGCTRSDD 300
  301 YHCFGTADRY NFAEQNLLLT PSERKGVFAQ FRYYFNDDVQ WYVKALGNRR ESTNQAAPEP 360
  361 IFLGPDAGTG NPLADNIVIS ALNPFNPFGF DLDSATNLIQ IGRRPVEGGP RRYEQQVDTQ 420
  421 YFGTGLVGTF EGAGRTWFWD VNGIYSKNKA EQTNYGSYNL YNINLALGDP AGCAAVAGCV 480
  481 PLDIFSGAGS ITPEMLRWIQ PVVRDRSQNE LSLFTANLSS ELFQLPGGAV SFASGYEYRK 540
  541 YEGSYQPDPL TVAGRYNGVP SLPTAGSYDV NEAYLELNIP IFANSALGDK LDLNIAGRYS 600
  601 DYSTFGGEFT PKYGLRWQVT DEFVLRTSYA EGFRAPTIGE LFGSAARADL QLSDPCSIGL 660
  661 GGTAPRGSAA NCAALGVPTG YQQANQQISV TTGGNEQLDP EHSRSFSAGF VFSPGFASDA 720
  721 SWSDRLDLEV TFYRHHVDGA IQAINAQTQL DLCVDTLDAL YCDGIARAST GGINAFNNRL 780
  781 TNLGSIKTDG WDVDLFWTLP EAAFGRFKLS WQNTLVGRYE ALGAAGQRQP QGPGIEVVDS 840
  841 AIPEWTSNAV LDWSLGNWTA SWTARHISKL TEQCGDAVEF AVCSDPTVGT NRLDAITYHD 900
  901 AQVGYRVDWL KGLQLTAGLN NVFDKDPPIC LSCSLNGYDA STYDIPGGRF WYARVDLKF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle