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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21243330, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLSSRRAHS TLGAAWIAQL LVLTLFGGAA PQLHAEVTTV SVESPNKVLQ VSLDVDGGTP  60
   61 YYRVQRLGEA VVQRSRLGFE LRDGRLDRGM VVLAQTRQSH DDTWEQPWGE TRLVRNHYNE 120
  121 LRVSLGERDG AQRTFDVIFR VYDDGLGLRY HFPKQAGIRE AIIDEEVTEF AIAQPADAWW 180
  181 IPAGEPIHYE YLYRHTPLNQ VALAHTPLTL RTDSGLHIAL HEAALVDYAG MWLRRTDNQR 240
  241 LRAQLSPAAE GWKVRRSLPF DTPWRTLQIA DQATGLVESN LILNLNEPNQ LGDVSWIKPS 300
  301 KYVGVWWSMH LNQQTWATGP KHGATTATTK RYIDFAADHG FRGVLVEGWN PGWDGEWFGN 360
  361 GGSFDFTRST PDFDLPALTR YAAAKGVHLI GHHETGCAVD HYEDQIAEAM DLYARFGVDS 420
  421 VKTGYVCDDG QVERRNPAGG NPLREWHDGQ WMARHHLHVV QEAAQRHIAV NAHEPIKDTG 480
  481 LRRTYPNWIS REGARGMEYN AWGQPPNPPE HEVNLVFTRL LAGPMDYTPG IVSLKGRNGQ 540
  541 AVPSTLARQL ALYVTLYSPI QMAADLPEHY LQHRDAFRFI EDVAVDWDQT RALNGEVGDY 600
  601 VTIARKDRHS RDWFLGSITD EHGRLLRVPL GFLEPGVRYT AQIYRDGDGA DYASNPFAFV 660
  661 REERQVGSAD TLELRLAPGG GQAIRFVPVG GKR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle