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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21107972, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTRRELCKA TGAAIAVLGA VPAAAQATQA SKTTALPPVA AAEALQLWYR EPANEWVEAL  60
   61 PVGNGRLGAM VWGGIAHERL QLNEDTLYAG GPYDSTSPDA LAALPQVRAL IFAGRYAEAE 120
  121 KLADAKLLSR PLKQMPYQPL GDLLLDFDRA DGISDYRRQL DLDTAVATTT FRSGGAVHRR 180
  181 EVFVCAQAQC IVVRLSCDRP GGISLRVGID SPQTGEVTAE PGGLLFSGRN GSFAGIEGRL 240
  241 RFALRVLPQV SGGKLSQVRD RLRIDAADEV VLLLSAATSY QRFDAVDGDP LALTAARLRK 300
  301 AAKLDFPALL RAHLADHQRL FRRVAIDLGS SEAVQLPTDE RVQRFAEGND PALAALYHQY 360
  361 GRYLLICSSR PGTQPANLQG IWNDLMQPPW ESKYTININT EMNYWPSEAN ALHECVEPLE 420
  421 AMLFDLAQTG THTARAIYDA PGWVVHNNTD LWRQAGPIDG AQWSLWPMGG VWLLQQLWDR 480
  481 WDYGRDRAYL SKVYPLFKGA AEFFVATLMR DPQTGAMVTN PSMSPENQHP FGAAVCAGPS 540
  541 MDAQLLRDLF AQCIAMSKLL GIDAQLAQQL AALREQLPPN RIGKAGQLQE WQQDWDMQAP 600
  601 EINHRHVSHL YALHPSSQIN LRDTPELAAA ARRSLEIRGD NATGWGIGWR LNLWARLADG 660
  661 EHAYRILQLL ISPERTYPNL FDAHPPFQID GNFGGTAGIT EMLLQSWGGS VFLLPALPKA 720
  721 WPRGSVRGLR VRGGASVDLE WEGGRLQQAR LHSDRGGRYQ LSYAGQTLDL ELGAGRTQQV 780
  781 GLNNNRLVTQ 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle