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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21241265, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRERAAGLRA WSILAVLAAL AAALGAGLQW SSLQGPWRAV SAVSAALAVV CGLCAAFAAH  60
   61 RAAHAQHALA QRLEEADLAR ERLQQELRRH GELEQELLRA KQAAEAATLA KGEFLATMSH 120
  121 EIRTPLNGII PMLELISSGQ LSLDQRDMLQ TATGSSLQLL RIVDDILDYS KLEANKLELE 180
  181 ITTFNLRELL DGVIQLLQRT AEGRQLRLSL DIEPSVRLLV RGDPIRLRQV LGNLIGNAIK 240
  241 FTERGSVDIQ LRRLGETRAQ HLLRFQVRDT GIGIAPDQQA RLFRSFAQAD ASTTRLYGGT 300
  301 GLGLAICKRI IDLMGGRIGV ESEPGRGSTF WFEIPLLKVI GDLQQATGAD AARVMVISSD 360
  361 ARLSQRLKRL LDSWGVSHVL METTQEALER VRRHSDGEGF RCVIADHDTL RYSARAVHRA 420
  421 LARPENASSA RLIWLYGEEP VPAELQDHAT LVPRLSPDET LRALVLPPEP KPAHATTLAS 480
  481 AMIPEPLPPP MANAREVRIL LVEDNPVNLL VAQKLLAVLG FEADTATDGE AALARMESTR 540
  541 YDMVFMDCQM PVLDGYAATR RWRAMETESG GRPVPIVAMT ANAMAGDRER CLAAGMDDYL 600
  601 SKPVAREQLD ACLQRWLPRQ ALLPGPSPAG QATHDPESAS AAAQARALPI LDNSVIDELY 660
  661 EVAGADTITI LQLFLEDAPL IIEQLEAAAA NRDSMQLRDL SHTLKSSSAN VGAQAVSNAA 720
  721 RRIELAARTG TIERPSVMVA LVIAEYARAR LALLGQVARL QADASTTNH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle