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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|17133726, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNFFKQTLA SLLGTLLGLF LFAGAGTTGL LLLLFAAASS SNTGPVVKDK SVVVFDLSMN  60
   61 ITDREPSAGE ELQNRFSGVT QERMTLRNVI DSLEKAQRDK RIVAIYLDGS RGGNNLGFAS 120
  121 LKEIRKALEE FRKSGKKVIA YGVAWDEKEY YLSSVADTIA LNPLGGLEIN GLSSQPMFLA 180
  181 GALQKYGIGV QVVRAGKFKG AVEPFLLDKL SPENREQTQK LLDDVWGEWR TTVGNSRKIN 240
  241 PQKLQAIADN QSLLEATEAK TNGLVDQVAY NDQVVADLKK LTGSNKKDNT FTQISLRRYA 300
  301 QVPGQSLGLE KNSKNKIAVV YAEGDIVDGK GDDGQIGGDR FARIFNKIRQ DENVKAVVLR 360
  361 INSPGGSATA SEVMQREIRL TRESKPVVVS MGDYAASGGY WIATDSNRIF AEPNTITGSI 420
  421 GVFGVLFNGQ KLANDNGITW DAVKTARYAD SQTVARPKSP QEIAIYQRSV DRIYNMFVNK 480
  481 VAQGRKLPTQ KVAEIAQGRV WSGVTAKQIG LVDEIGGLNA AIEYAAKAAK LGKDWQLREY 540
  541 PRESSFEERF FGGVVEEIST TLGIKKLDVK PNDPLTVQIQ KIQQEISILQ TMNDPQGVYA 600
  601 RLPINLKIE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle