YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17231472, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTAILPSTF LLTLLLAVGL LFFIRASTKD RTEMAQLISE QEETVLMPQL QEYFRSRSYR  60
   61 VAEVDHEKNQ VTFEGFVKPS IFLAVFLTLL ASAGLVCLSL VFALLFPRFG NIFLGLVLFA 120
  121 PLSGIFYWKK AGRLEKVVLK LESVANQPQL FSKITVVAHR DEILELQKAL PLKPNE

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.85
Transmembrane Helix	6	26	0.90
Cytoplasmic	27	80	0.95
Transmembrane Helix	81	104	0.91
Non-Cytoplasmic	105	109	0.75
Transmembrane Helix	110	128	0.93
Cytoplasmic	129	176	0.95