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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|17231416, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQHPNMKSF RKNSLYQGIK ITVIMLVVLC ILLLGFLFYT VRRSFPVENG AIALSSIKSE  60
   61 VTIKRDQWGI PHIYASNSHD LFMAQGYIHA QDRFWQMDFW RHIGSGRLAE MFGASQVETD 120
  121 KYLRTMGWGR VAQQEIQQMD AVMKADLQAY ADGVNAYIQE HQGSALSLEY AVLQLLNPGY 180
  181 KPEPWQILHS LTWGKVMAYD LGRNFQSEIE RTILLKTLTP AQVEELFPPY PANLPVILPD 240
  241 LQAQALPEKQ LITTVIKEVG EIAPVLESIK KPMVALEKLI GHTGVGIGSN NWVISGERTA 300
  301 TGKPILANDP HLAVQMPSIW YEVALHCIKQ TDDCPYNVSG FSFPGMLGVI VGHSDRIAWG 360
  361 VTNTQGDVMD LYIEKINPNN PNQYEVNGKW VDMQVLPETI KVAGKESIVQ TVRYTRHGPI 420
  421 LSDVSPNLKQ FNQKSTVNLP QNYAVALRWT ALEPSNLASA ITQINRAQNW QDFRTAANKF 480
  481 DIAAQNLVYA DIEGNIGYQM PGKFPIRNKG NGRYPVPGWT DEYEWQGYID FEKLPQSFNP 540
  541 SSGYIVTANN LVANQYPYVI TTDWVYGYRA KRIVDMIAQQ DKQISLPDVQ QIQGDNFNLN 600
  601 AQNIVPILQQ ISFNDSRLQT AQKLFQNWNL QLVTQSSAAA LFEVFWKHLL ADTFHEQLPK 660
  661 EYFPDGGDRW YAVIENIIQQ PNSNWWDNRQ TSQVENRDQI FRQAFTKAVD ELERLQGKNP 720
  721 QSWNWGKLHT ITFRNATLGK SGVAPIEALF NRGAFTTSGN GETVNANRWR ANQSFEVTDI 780
  781 PSLRIIVDLA NLDDSVAIHA PGQSGHAFHQ HYDDMIESWR KLEYHPMLWQ QQTVTANTSA 840
  841 KLQLMPK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle