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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25533209
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGNTLVGRY QIISHLGGGG FGETFVACDT HLPGLPKCVV KKLQPQANDP ATLEIARRLF  60
   61 DTEAQVLYKL GSCDRIPQLL AYFEEDAEFY LVQEFIPGHD LSKELTPGKV FTQDEVTILL 120
  121 QEILTILEFV HQQNVIHRDI NPRNLLRRQD GKLILIDFGA VKQITTQIVT PTGENKSTVI 180
  181 IGTPGYIPGE QAQGNPKFSS DIYAVGIVAI QALTGLLPHQ LEHDADTHEI IWQNHAQVSS 240
  241 EFARFIDKMV CYDFRQRYAA ATTALQALTE LTQPASNTIA ITPTLPPAKF RFNHTKKSIF 300
  301 IKLLLAILLT SATGIASVFV VNSINSNNAT DLAKKGNTFF ELQRYKDALS AYEQAVDIRP 360
  361 DYAPAWQGKG KTLFRLKQYQ DALTAYDKAI QIQPDYVEAW SGRGFSLQNL QRYSEAIASF 420
  421 DKALQLNENY PEVWNARGEA FSNLKQYDQA IKSYDKAIEF NSDAYESFYN KGLALQSMKE 480
  481 YNEAINAYNK AIEIKSDYER AWYNLGNSLV NLNRYEDAFK AYDKAVQYKT DYAIAWLSRG 540
  541 NVLIILRRYP EALESFNQVI KFNPNNYQAW YGRGWSQHQN QRYAEAIESY KKAATIKPSN 600
  601 YEIWYSLGNS QYILQQYQEA IASYNKAVRY RPKHIESWYS RGNALFSLKQ YKEAIASYEQ 660
  661 AIKHKPDYSQ AINARDEAQR QLQAATPKPV VIPVMPTPEF TNPPQDN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle