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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|17231134, gi|...
Protein type: Transmembrane
Type Confidence: 0.72
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFSWRVLVL WTLPALVIGF FFWQGTFAGA PADMSKNAAN TRMTYGRFLE YVDAGRVTSV  60
   61 DLYEGGRTAI VEAQDQDIEN RVQRWRVDLP VSAPELISKL KDKKVSFDAH PARNDGAIWG 120
  121 LLGNLVFPIL LITGLFFLFR RSNNLPGGPG QAMNFGKSKA RFQMEAKTGV KFDDVAGIEE 180
  181 AKEELQEVVT FLKQPERFTA VGARIPKGVL LVGPPGTGKT LLAKAIAGEA GVPFFSISGS 240
  241 EFVEMFVGVG ASRVRDLFKK AKDNAPCIIF IDEIDAVGRQ RGAGIGGGND EREQTLNQLL 300
  301 TEMDGFEGNT GIIIIAATNR PDVLDAALLR PGRFDRQVTV DAPDIKGRLE VLQVHARNKK 360
  361 LDPSVSLEAI ARRTPGFTGA DLANLLNEAA ILTARRRKEG ITLSEIDDAV DRVVAGMEGT 420
  421 PLVDSKSKRL IAYHEVGHAL VGTLLKDHDP VQKVTLIPRG QAQGLTWFTP NEEQGLISRS 480
  481 QLKARITGAL GGRAAEEIIF GSAEVTTGAG GDLQQVSGMA RQMVTRFGMS DLGPLSLESQ 540
  541 QGEVFLGRDW MTRSDYSESI AARIDSQVRL IVDECYQNAK KIMREHRTVT DRIVDLLIEK 600
  601 ETIDGEEFRQ IVAEYTDVPD KQQFVPQL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle