YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MTNA_NOSS1
Protein type:	Transmembrane
Type Confidence:	0.66
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYPVIWQNN CVLLIDQTRL PNEYAVVEIH RSEDMARAIQ TMIVRGAPAI GVAAAYGMYL  60
   61 GAREIETGER QEFLQELEKV AQLLRATRPT AVNLFWAISR MQKTAYKTLG TVAQIKENLL 120
  121 QTAQAINAED LQTCQAIGDN GLAILPKTPE KLTLLTHCNA GALATAGYGT ALGVVRSAWR 180
  181 EGRLERLFAD ETRPRLQGAK LTTWECVQEG IPVTLITDNM AAHCMKQGLI HAVVVGADRI 240
  241 AANGDAANKI GTYSLAIVAK AHNVPFFVAA PVSTIDFELA DGSQIPIEER NPVEIYQVGD 300
  301 TTLTPPGVKF YNPAFDVTPA ELITAIITEN GAFAPHVLTK SSQQAVV

Type	Start	End	Confidence
Cytoplasmic	1	40	0.62
Transmembrane Helix	41	62	0.57
Non-Cytoplasmic	63	347	0.93