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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25290696
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTYTMSANSL PESSTTWHSL EVDKALGLLN SNADSGLTTE EVEQRLQKYG PNELEEHGGR  60
   61 SAWEILFDQF KNIMLLMLIA VAFISGSLDF ISWQAGELKP GEIPFKDTIA ILAIVILNGI 120
  121 LGYVQESRAE QALAALKKLA SPSVRVIRSG KLVDVAAKDI VPGDVMLLEA GVQISADGRL 180
  181 IEQANLQVRE SALTGEAEAV NKQASLQLPE DTSLGDRINV VYQGTEVVQG RGKVLVTNTG 240
  241 MTTELGKIAT MLQSVENEPT PLQQRMTQLG NVLVSGSLVL VAIVVVGGVI QAGNFSPLRD 300
  301 LLEVSLSMAV AVVPEGLPAV ITVTLALGTQ RMVRRNALIR KLPAVETLGS VTTICSDKTG 360
  361 TLTQNKMVVQ SIYTNHKTFR VTGEGYAPVG EFQLDGQNVP AEDYPEIPAL LVACAVCNDS 420
  421 VLQKEAGEWM ILGDPTEGAL VTLAGKAGIE KDQWNYKLPR VREFPFSSER KRMSVISQVE 480
  481 KVATGEPTMA TVDPTLAGLV NSEPYIMFTK GSPELILARC TAIHLGANSD HLNDEQRQQI 540
  541 LAANDQLASK GLRVLGFAYK PLAEVPPEGS DETSEQGMVW LGLVGMLDAP RPEVRAAVQE 600
  601 CREAGIRPIM ITGDHQLTAR AIATDLGIAQ EGDRVLTGQE LQRMDDQELE QQVDLVSIYA 660
  661 RVSPEHKLRI VQALQRRGRF VAMTGDGVND APALKQADIG IAMGITGTDV SKEASDMVLL 720
  721 DDNFATIVTA TKEGRVVYTN IRRFIKYILG SNIGEVLTIA AAPLMGLGGV PLTPLQILWM 780
  781 NLVTDGLPAL ALAVEPPEPD VMKRPPFSPR ESIFARGLGS YMIRIGIVFA IISIILMKWA 840
  841 YDHSHAVTGP GLDPERWKTM VFTSLCIAQM GHAIAIRSNN QLTIETNPVS NPYVLGAVVV 900
  901 TTILQLMLVY VPPLRDFFGT HWLPLDELAI CVGFSALMFV WVEMEKLFFR FMGKRTV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle