YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25359443
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKLLKISRI IDAFTERIGR YTSWLVLVMV ILGVWNVVGR YLGRISGNNL TSNAYIEAQW  60
   61 YIFDVIFFLG AAYTLKHNEH VRVDIFYSNW QRRRKAIADF LGTIFFLIPF SIIVIFVSWE 120
  121 TIVASWQIGE LSPDPGGLPR YPIKAMIIVG FVLLIIQGIS QAIKNLAIIQ GRLEPQEENH 180
  181 DTGL

Type	Start	End	Confidence
Cytoplasmic	1	20	0.96
Transmembrane Helix	21	39	0.98
Non-Cytoplasmic	40	57	0.86
Transmembrane Helix	58	76	0.94
Cytoplasmic	77	95	0.95
Transmembrane Helix	96	119	0.91
Non-Cytoplasmic	120	140	0.92
Transmembrane Helix	141	163	0.86
Cytoplasmic	164	184	0.96