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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|17230080, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGEMLIKPA LLHRLCLAAT VSVLISNQTV WAEVNTSQNK TPQLSKGVPI LAQAPTTEIL  60
   61 EVTGVKANPT EKGVEVILQT TSGEKLQLVN RSQGNAYIAD IPNAQLRLPN GDTFTFTSPK 120
  121 PVEGISEIIV SNLDANTIRV TVTGEAGLPV VELFDSDEGL ILGVLSAAPS QTQATPTPEP 180
  181 EQPAATTDQP IELVVTGQQD SYRVTNAATA TKTDTPLRDI PQSIQVIPRQ VIEDQRATQL 240
  241 NEALRNVSGV QPSNSAGRTR DRFVIRGFDD FNSVIRDGFK ENTSVYRETA NIERIEVLKG 300
  301 PASVLFGQLE PGGVINVITK QPQREPFLIM GLEAGSYGFF RPTVDFNSPL NDSKTLRLRV 360
  361 NAAVEISESF RDFDKETSRF FIAPVLAWEI GDRTSLVFDL EYLKDSRPFD RGLVALGDRV 420
  421 AEIPFNRILG EPFDSKEVED LRIGTRFEHG FNDNWKLRSA FRIVSTQTSS FVTEPGSLDE 480
  481 ATGLLSRDFG VDRPTPDETY AFQTDLIGKF KTGAIEHELV IGFDFNRQTN FVDDRRSAPA 540
  541 PAIDIFNPVY LTARPNIESD PFRGLFAADN IGIYIQDQIK LAENLKLLIG GRYDFTNQSF 600
  601 LSIVDGVKFF DISDQAFSPR IGIVYQPITP LSLYASYSRS FAQNFGIQRD NSRIEPERGT 660
  661 QYEVGVRGEF LDGKLIASLA GYQITKTNVA TPDPADLNFS IPVGEVRSRG IEFDIAGELA 720
  721 KGWNIIASYA YTDAKITEDN TDNEGNRLNR VPENSASIWT TYELQSGALQ GLGMGVGLFF 780
  781 VGERQGDLSN SFTVPGYTRT DAALFYRRDN WNIGLNFKNI FDVNYIESTT SRTSIDAGIP 840
  841 FTVIGSLSVK F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle