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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|17229915, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEALVRCLRS GQFLLIIDNL ESVLQPDRQW GSLFYGDFFQ AWIESGGNSK VLVTTRERPE  60
   61 LKGFEWLTLK GLQVDEGVAL LTALGIKGNL GEFVELVDGH PLLLRLVADL LKEEYPQDPD 120
  121 LSRLADLGLG NLQQLLTDSQ VVGVHRRENV GMVLVLDASF HRLSELQKAL LLNISVYRGA 180
  181 VDSAAAVAML PGNSAAEIEK ELRNIVKRSL LVEKLNGKRR FEFQPVVLEY VRYKAGDQSE 240
  241 AHQRAIDYYR SVAKQPPWTT KDDVREYLEI FDHFYQLQDY DSAFDNIRVC SKFLGLCGFF 300
  301 VDKVELYGQL ISKWKEIGER ENWNYGASLT ALGNAYRYLG EYQRAIELFQ QSLEIFRDIG 360
  361 DRNGVSNSLI GLGNTYNSVG EYQRAIELFQ QSLEISRDIG DRNGVGGSLM GLGNAYNSVG 420
  421 EYQRAIELFQ QSLEISRDIG DRNGVGNSLI GLGNAYHSLG EYQRAIEFRQ QSLEIFRDMG 480
  481 DRNGVSISLN NLGNTYYFLG EYQRAIEFHQ QSLEISRDIG DCNGVGRSLN NLGNAYYSLG 540
  541 KYQQAIEFHQ QSLEIKRDIG DRNGVGTSLN NLGTAYSSLG KYQRAIELFQ QSLEIKRDIG 600
  601 DRNGVGTSLM NLSNAYYRCG KIREAFAVWH QAESIFQELQ LPFEAMPYPQ WLKSLIKFAQ 660
  661 RGWFQFILCF IFGLIAFPFA LVWLILLFLW PSISSQFRR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle