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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|17229677, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMKIAIFLA GALALVAIQP VWAESINQME VEEQKSLTAS VKKRLRTVKE KEWLAQANTA  60
   61 VIQVTGVKAN PTDKGVEILL ETSQGEKLQI TNRSAGNSYI TDISNAQLRL PSGESFTFRS 120
  121 DKPIAGITEI TVTNQDANTI RVSIVGETIL PTAELFDSDE GLIFGLTSVT ASLPPQQPET 180
  181 QSEQPSPAAE EPIELVVTGE KDGYQVPNTA TVTRTNTPII DIPQSIQVVP RQVLEDQQIT 240
  241 RVDDALRNVP GVLGSTNAFI GNQITIRGFS TSNLPILRDG FRIYENFSFQ ETSNLERIEV 300
  301 LKGPASVQYG QLDPGGVINL VTKKPLSEPF YEIQAQFGSY GLIRPSFDVS GPLTDDGKLL 360
  361 YRLNATYQRE EGFRDFNTET ERFFIAPSLT WKISDRTNVD FSLEYLDSTR PFDTSLVAFG 420
  421 RSVADVPYSR VFNDPDDFID TKSFSIAYNL EHRFSDNWTL RNSFRYLQQD LFTQATLAGS 480
  481 LNETTGILTR TYAQREYKSD DYSLQTNVVG KFTTGSIKHT LLAGVDFNRG LLDDLVFRGT 540
  541 RTTLNIFNPV YGVPPRTDFS TLPPATPFKN ETTRLGFYLQ DQIALNNQFT VLAGLRYDTV 600
  601 DFKDTFTDES KYDSAWSPVI GLVYKPVENL SIYTSYSRSF VPSFSRDANG DFLQPERGAG 660
  661 YEVGIKAELL QGNLFATLAY FDITKQNVST ADPDVLGASV ATGEQRSRGI ELSAVGTIAP 720
  721 GWNIIAGYAY TDAEISKDNT IAVGNRLPGT PKHSANLWTT YEIQKGSLQG LGFGLGVNYV 780
  781 GKRFGNFQND FEVDSYFLTN AALFYRQNNW RVGLNFNNIF DINYISSAAT LTRTRSIEPG 840
  841 QPFTVVGSIS LEF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle