YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25533714
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLSLFDNK NGLNCQNERG FTLPEILAVI LMVGILAALA LPYWLTFVDT QRLNKAQYEV  60
   61 HNAIRQAQSQ ASKEKLTWQA SFREQNGIVQ WAVHPASVSP TNANWNNLDS RVRLDGESTL 120
  121 QQSNNVRRIQ FDYRGSVKQP PLGRITLSSK SRGMIKRCVY VSTILGAMRT AKERNRANSG 180
  181 GDYCY

Type	Start	End	Confidence
Cytoplasmic	1	20	0.71
Transmembrane Helix	21	45	0.85
Non-Cytoplasmic	46	185	0.72