YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25299174
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQHNKPLII GVSGASGLIY AVRALKYLLT ADYEIELVAS KSTYMVWQAE QETRMPSEPK  60
   61 QQEQFWREQA GVALSGKLRC HPWSDVGANI ASGSFRTLGM IVIPCSMSTV AKLAGGLSSD 120
  121 LLERAADVHL KEGRKLVIVP RETPFSLIHL RNLTTLAETG VRIVPAIPAW YHNPQTIEDL 180
  181 VDFVVARTLD QLDIDCVPLK RWEGGKHNS

Type	Start	End	Confidence
Signal Peptide	1	24	0.79
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	209	0.96