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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|17228516, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSALSIWYRY RFYVLLLSVS LVTVLFFSNK PAESQYKTTL SRVNSQATLV ANNPHQFRVT  60
   61 ENVHKTVLDN GLTVFIKEVP TVPIVSVQVW YKFGSRHEES GVNGIAHQLE HMMFKGTKSR 120
  121 PIQFGRLFSA LGSDSNAFTS YDQTAYYGTV ERDKLKVLLV LEADRMQNAL IDADKLASEK 180
  181 RVVISELQGY ENSPEYRLNR AVMQAVFPNH PYGLPVGGTK ADVEKFPVEK VQEYYQDFYS 240
  241 PENAVLVIVG DCQAKETLAT VKEIFGGIPQ RQQPTANSQQ SIINSQQPTA NSPIVLREPG 300
  301 AAGLLQVIYP LPPASHPDMP ALEVVDYILT EGRNSRLYKA LIESGLASEV EASIGGLQQA 360
  361 GWYELLVTAD PDQDIGKIDS VLNKAIANLA RTDVKAEELA RAKRQLEAAI ILSNRTITDQ 420
  421 AMQLGNDETT VGNYRFTDYY LSAIRQVTSA DVVRVVNKYL PKSHRKVGIF QPTISTSTKE 480
  481 VGNKKSTQRT QENLAGDSSV TSSEVMKYLP SLDITTDNIP QKSQTRLPQQ FTLANGLQVF 540
  541 LLPDKSTPTV TLSGYVKAGT EFDPDGQAGL ASLVADSLMS GTKTKNASTL AQVLDDRGVT 600
  601 LDFAAYRNGM RIQADSLAED FPVLIRTLAD GLKNSTFPKK ELDLNLQQAV TSLKMELDDP 660
  661 GEVARRIFLQ SVYPKKHPLH TFPTVESLRK IRRQDVIAFS QKYYRPDTTV LVLMGDFEPQ 720
  721 QVRSLIQAEF GDWQASGEPP SINYPQVGLP KTTTRENPVL PGKTQAITYL GYAGIKRQDP 780
  781 RFYAALVLNQ ILGGDTLSSR LGAQVRDRQG LTYGIYSDFQ AEKDFGTFWI EMQTSPEDAN 840
  841 KAIASTQQVL EQIHQQGVTA SEVETAKRTL IGNYNVSLAD PEELTNKILM NQVYGLEPGE 900
  901 LHFYNQKIQQ VTLTEVNQAA SELLHPDQVV VVTAGPSMVA RQNVR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle