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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6911992, gi|2...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSTRRHGA ARSAREGSRR RLPLRLLLPL LVLVALVAML MLRGYVHSEI LADHRVQPPA  60
   61 ATDKVPQKIL EGGPVIDVRG GRTESLSVPD HRLVLTFDDG PDPTWTPRVL DVLKKHDAHA 120
  121 VFFVTGTMAS RYPDLVERMV DEGHEVGLHT FNHPDLSFQS EKRIDWELSQ NQLAITGAAG 180
  181 VRTSLFRPPY SSFADAMDNK SWPVTEYIGG RGYLVVVNNT DSEDWKKPGV DEIIRRATPK 240
  241 GGKGAIVLMH DSGGDRHQTV QALDRFLPDL KKKGYEFDNL TEALDAPGAM SPVTGAELWK 300
  301 GRAWVFLVQA SEKLTDGLVV GLAVIGTLVI GRFVLMLLLS GVHARRVRRR RFRWGPAVTE 360
  361 PVTVLVPAYN EAKCIENTVR SLVASDHPVE VIVIDDGSSD GTARIVEGLG LPGVRVIRQL 420
  421 NAGKPAALNR GLANARYDIV VMMDGDTVFE PSTVRELVQP FGDPRVGAVA GNAKVGNKDS 480
  481 LIGAWQHIEY VMGFNLDRRM YDVLGCMPTI PGAVGAFRRS ALEPIGGMSD DTLAEDTDVT 540
  541 MALHRAGWRV VYAENARAWT EAPESVGQLW SQRYRWSYGT MQAIWKHRRA VIEKGPSGRF 600
  601 GRVGLPFVSL FMVLAPLLAP LIDVFLLYGL VFGPTEKTIV AWLGVLAIQA VCAAYAFRLD 660
  661 REKLTPLISL PLQQILYRQI MYVVLLQSWI TALTGGRLRW QKLRRSGGVS APPPGADGVP 720
  721 PQRRSGAMDG RPVG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle