YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6714813, gi\|2...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAIRTRRRK AAALATAAVL AAVAAPSLTA TPATATTTTA STASTASTAS TASTTNTDYD  60
   61 STYYKDAIGK TGASLKSSLH TIISDQTKLS YSAVWDALKA TDEDPDNSGN VILLYSGVSR 120
  121 SKSLNGGDTG DWNREHVWAK SHGDFGTSTG PGTDIHHLRP SDVRVNSVRG NKDFDNGGSA 180
  181 VSEGGGSLTD SDSFEPRDAV KGDVARMIFY MAVRYEGGDG FADLEVNGQV DNGSNPYIGK 240
  241 LPVLKAWNDE DPPDAFEEHR NQVIYDDYQH NRNPFVDHPE WVESIW

Type	Start	End	Confidence
Signal Peptide	1	35	0.93
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	286	0.99