YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21220927, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGPAGRMMA GGGPDQRSMD FKGSSKRLVS QFRPERATLF TLLACVVVSV GLNVVGPKIL  60
   61 GRATDLVFAG IVGRDMPSGA TKEQVLATMR EHGDGNVADM LRSTDFVPGQ GIDFGAVGEV 120
  121 LLLALATFAV AGLLMAVATR LVNRAVNRTM FRLREDVQTK LSRLPLSYFD KRQRGEVLSR 180
  181 ATNDIDNIGQ TLQQSMGQLI NSLLTIIGVL AMMFYVSWIL ALVALVTVPL SFVVATRVGK 240
  241 RSQPQFVQQW RSTGQLNAHI EEMYTGHALV KVFGRQEESA KQFAEQNDAL YEAGFKAQFN 300
  301 SGIMQPLMMC VSNLNYVLVA VVGGLRVASG QLSIGDVQAF IQYSRQFSMP LTQVASMANL 360
  361 VQSGVASAER VFELLDAEEQ SADPIPGARP EDLRGRVELE HVSFRYDPEK PLIEDLSLKV 420
  421 EPGHTVAIVG PTGAGKTTLV NLLMRFYEVS GGRITLDGVD IAKMSRDELR AGIGMVLQDT 480
  481 WLFGGTIAEN IAYGASREVT RGEIEEAARA AHADRFVRTL PDGYDTVIDD EGTGVSAGEK 540
  541 QLITIARAFL SDPVILVLDE ATSSVDTRTE VLIQKAMAKL AHGRTSFVIA HRLSTIRDAD 600
  601 TILVMEDGAI VEQGAHTELL TADGAYARLY KAQFAEAVAE VG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle