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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|156980959, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKNKILIYL LSTTLVLPTL VSPTAYADTP QKDTTAKTTS HDSKKSNDDE TSKDTTSKDT  60
   61 DKADNNNTSN QDNNDKKFKT IDDSTSDSNN IIDFIYKNLP QTNINQLLTK NKYDDNYSLT 120
  121 TLIQNLFNLN SDISDYEQPR NGEKSTNDSN KNSDNSIKND TDTQSSKQDK ADNQKAPKSN 180
  181 NTKPSTSNKQ PNSPKPTQPN QSNSQPASDD KANQKSSSKD NQSMSDSALD SILDQYSEDA 240
  241 KKTQKDYASQ SKKDKNEKSN TKNPQLPTQD ELKHKSKPAQ SFNNDVNQKD TRATSLFETD 300
  301 PSISNNDDSG QFNVVDSKDT RQFVKSIAKD AHRIGQDNDI YASVMIAQAI LESDSGRSAL 360
  361 AKSPNHNLFG IKGAFEGNSV PFNTLEADGN KLYSINAGFR KYPSTKESLK DYSDLIKNGI 420
  421 DGNRTIYKPT WKSEADSYKD ATSHLSKTYA TDPNYAKKLN SIIKHYQLTQ FDDERMPDLD 480
  481 KYERSIKDYD DSSDEFKPFR EVSDSMPYPH GQCTWYVYNR MKQFGTSISG DLGDAHNWNN 540
  541 RAQYRDYQVS HTPKRHAAVV FEAGQFGADQ HYGHVAFVEK VNSDGSIVIS ESNVKGLGII 600
  601 SHRTINAAAA EELSYITGK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle