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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34809540
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNWIIVCCL LIVQLAHAND LGFSLFEKRE LSSQNPFGYP IGCSPQDVAI IPGLTMELYS  60
   61 YPIDSGTPPN CYDASYVDPE YPRTGYLKRK MVGKSTGVTG NLNYKYSVEK ACMVKYGNLP 120
  121 AGYNYNEPLT VSNFTMILYG YFKAQTTGLH TFFVNADDLL YINFGAGNAF DCCKREDSKT 180
  181 KLGEYVAYDI WHVDSSKNKV SLFLEKDLYY PIRMFFNNIG KDSSLDLSFS VNGATDQISD 240
  241 FSGYLYSVPD QPDICPAHIG YDTTCRSIDS TTTYSTNFIT TKPAENVVPV TSTIYYIATP 300
  301 CSKSQSQTPS CQGGFLDPLK NTCYYPKPED PKPEDPKPED PSHNPSSVNP SSVNPSSVNP 360
  361 SSVNPSSVNP SSVNPSSKPA DPSPADPSHN PSSVNPSSVN PSSVNPSSVN PSSKPADPFP 420
  421 ADPSHNPSSV NPSSVNPSSV NPSSKPADPS PADPSHNPSS VNPSSVNPSS KPVDPSPADP 480
  481 SHNPSSVNPS SVNPSSVNPS SVNPSSKPAD PSPADPSHNP SSVNPSSVNP SSKPADPSPA 540
  541 DPSHNPSSVN PSSVNPSSKP VDPSPADPSH NPSSVNPSSV NPSSKPADPS PADPSHNPSS 600
  601 VNPSPSIVSP SISTRTVTLS NGSTTTVTVT VTPPSPNGGS SNSNTDSFSL PPPYTTTVSK 660
  661 STTTETDIVS FFPSTDSDGH TRTGTTTITL TGSKPGNNGD SDSFSLPPPY TTTVSKSTTT 720
  721 ETDIVSFFPS TDSDGHTRTG TTTITLTGSK PGNNGDSDSF SLPPPYTTTV SKSTTTETDI 780
  781 VSFFPSTDSD GHTRTGTTTI TLTGSKPGNN GDSDSFSLPP PYTTTVSKST TTETDIVSFF 840
  841 PSTDSDGHTR TGTTTITLTG SKPGNNGNVG TSSVPPVGNI AITPSVSTRT VTFTNGIIST 900
  901 ITTTIRPPSP NGGGSNSNTD SFSLPPPYTT TVSKSTTTET DIVSFFPSTD SDGHTRTGTT 960
  961 TITLTGSKPG NNGNVGTSSV PPVGNIAITP SVSTRTITFT NGIISTITTT IRPPSPNGGG1020
 1021 SGNNGNTPSP NGGGSGNNGN TPSPNGGGSG NNGNTPSPNG GGSGNNGNTP SPNGGGSGNN1080
 1081 GNTPSPSKTT FPISSSSVFN IPNLSEYKGK ASKPIEVAPV KLLILVLCTF FLI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle