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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34809536
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMHSEPQRIK FLTFNTWGLK YVSKHRRARL RALAEKLAGH QNSNIKSLPN SEDLYADDDF  60
   61 EDYDIVALQE IWCKEDWDYI VEQCGKIFPY YRWFYLEYCQ ALDWQYFQKF RLNQRFLYRY 120
  121 PINGRPSAIH RGDWYVGKSI AITTLRNREN PTTPIVIMNS HMHAPYSLTG DAAYSCHRSC 180
  181 QAWDFAKLAK IYREAGYAVV IVGDLNSRPG SLPHNILTKE AGLIDSWEQL HGKQDLEKIR 240
  241 TMNAMDQLVY ACTTCDSTLN TWRATRRPDE ACRLDYALVD PRRLTTIKTG IKFTELIDGV 300
  301 GSFSDHFAYS CTLEVLRDNN VKKLQTELSD RIKIHEDLEL CIEDYLITAR KQKFLRGLHF 360
  361 WMSVFLMISC AVVTTFTSNV AGWSSIFWVL FAIVVAVTGV IDGMISFLFG RSEIRALWEV 420
  421 QHEVKDSKRY LEEMSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle