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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7465201
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNLKSLLSF LFASFWVAIP LIALYACTCA IATFIENDYG TSASKAIVYN TPWFNFLHAY  60
   61 LLVVLIGTFI NSKALERKRY ASLFFHSSLI FIILGAAITR FFGVEGLMHV RENSAQSSFE 120
  121 SADTYLNITL NDEKKLSLKT PLTFYYSKRL KPIHATLDHK PLLLEPLEIY KQNAIKKDDA 180
  181 TILVLKATYN GVSRKFNLIK TNRNEGIEES EMFKDDKLSL SFGSAYIELP FQIKLKRFEL 240
  241 ERYAGSMSPS SYASEVEVLK LDNTLIKPYR IFMNHVLDYE GYRFFQSSYD TDEKGTILSV 300
  301 NKDPGKIPTY LGYAMLILGA LWLLLDKKGR FLKLSRFLKS QQAASFLFAL ILVSPFTSSF 360
  361 ANEGQIDMHG GKSAKIERQK IENPANKEDS KSAILERLKR LREYSKDHLK AFQRLQVQDF 420
  421 DGRIKPLDTI SIEYIHKILR KDDFQGLNAM QVLLGIMFFP NDWRSIKMIY TSNKALRKLI 480
  481 GTPLDESRIA FRDAFDSRGY KLKNLVEEVN QKSPNARNEL DKDALKVDER INLVYTLFSA 540
  541 QFLRIFPSDK TTAWLSPIEA INSPNKEISS VATEFLKNIF SGFDDALKTN QWDKVEKTLK 600
  601 DLSTYQQEHA KNLYLSSSKV DSEIFLNHTN FFNSLTLPYI FLGLLLFIVV ITSLVKNTIP 660
  661 NIWLTKILYM AILLCAIAHS VGLILRWYVS GHSPWSNAYE SMLYIAWASV IAGFVLRSKL 720
  721 ALSASSFLAG IALFVAHLGF MDPQIGPLVP VLKSYWLNIH VSVITASYGF LGLCFVLGIL 780
  781 SLVLFILRKQ GRFNLDKTIL SISAINEMSM ILGLFMLTAG NFLGGVWANE SWGRYWGWDP 840
  841 KETWALISIC VYALILHLRF LGSQNWPFIL ASSSVLGFYS VLMTYFGVNY YLSGLHSYAA 900
  901 GDPLPIPTFL YFLVAIPFAL VILAYFKRHL SLPKLV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle