YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21300870, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFLGLLSYV SLLVQICFVT VSIAAGLYYL AELVEEYTVI AKKVISWMVG VTACLYVIFI  60
   61 FTEHFSWTMV LCGLGAQALH GLILTDFPYV RFLSPAFIGA VGLLVGNHYL AFVYFQLQYH 120
  121 AFTEVLAYFT LCLWLVPFAL FVSLSANDNV LPTSNERTHL LSGNDDVVTN YFSSRKKMGL 180
  181 LSLFSYAKES LLPERNKKAF

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.67
Transmembrane Helix	8	31	0.90
Cytoplasmic	32	38	0.70
Transmembrane Helix	39	60	0.83
Non-Cytoplasmic	61	64	0.51
Transmembrane Helix	65	84	0.70
Cytoplasmic	85	91	0.45
Transmembrane Helix	92	112	0.90
Non-Cytoplasmic	113	124	0.45
Transmembrane Helix	125	147	0.85
Cytoplasmic	148	200	0.60