YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115462913, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMLLRRPLR ALTLPLLRPH LSTAAAAEVS PADHHPDLLS PPFGYLPGHP RPDAKHDELI  60
   61 LAVPRASPGR HVAAKERKAG RVPAIVFEQE NGQEGGNKRL VSVQSKQIRK LVDHLGRSFF 120
  121 LSRLFRLQVW SEHAGQGVLI ESVRVLPRKV HLHAGTDEPL NVTFMRAPSS ALLKIDVPLM 180
  181 FIGDDASPGL RKGAYFNTIK RTVKYLCPAD IVPPYIEVDL SELDVGQKLL MRDLKVHPAL 240
  241 KLLQSPEQPI CSIIGSRAPE QKKSK

Type	Start	End	Confidence
Signal Peptide	1	26	0.99
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	265	0.99