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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|51978231, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.95
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVAATLSLP FAVYATPILA ATAATENMAV QSPKKHVFDA VIKAYKDNSD EESYATVYIK  60
   61 DPKLTIENGK RIITATLKDS DFFDYLKVED SKEPGVFHDV KVLSEDKRKH GTKVIQFEVG 120
  121 ELGKRYNMQM HILIPTLGYD KEFKIQFEVN MRTFVESDIE EDEEEQIEDT QNIIRDKRLQ 180
  181 QAINKNVLNR KDVNEPIFEE DLKEIKELNI YAGQGIESLK GLEYMENLER ITIQGSDVRN 240
  241 IAPISQLKRL KVVDLSFNKI ENVEPLVNLE KLDILELQNN RIADVTPLSQ LKKVRTINLS 300
  301 GNKISDIKPL YNVSSLRKLY VSNNKITDFT GIEQLNKLGT LGVGSNGLVN IEPISQMSGI 360
  361 VELNLEKNDI KDITSLSKLT GLQSLNLEEN YVSDVSSLSN LINLYELKLA TNEIRDIRPI 420
  421 QELGKRIKID AQRQKVFLDE AYMNEEVKIP VYDVNGTALQ NIEWKSEGGS ITNGVIKWNS 480
  481 LGEKMYEFKM DAGESKIRFQ GRVIQNIVEK REESSNVIQD MKLRQYMNKH NFERKNVNTP 540
  541 ITKEDLLTVK ALKITDGKKE GITDFSGLEF MTNMEELILQ NANMKNVKFI SSLRNLKSVD 600
  601 LSYNQIEDIK PLHSLENLEK LNISNNGIKN VPELFKMQTL KTLDLSNNKL DNAALDGIYQ 660
  661 LENLDALLVN NNEINNLDEI GKVSKLNKLE MMGNKVRDIS PLANLKNLQW LNLANNKIQD 720
  721 ISSLSSILDL LSLKLAGNEI RDVRPIIQLA QWITVDIKNQ KIVLEDGQMN QEIQIPIYDL 780
  781 EGEIFEDIEL KSEAGIVTDR GTVVWKTPGE KNYVFSLNGN YHGLSLLFSG TVMQNIVAKE 840
  841 EPKEPVEEVE GSKEEPIKEA EGSKEEPKGP AKEVEGPKEE VKEPAKEVEG PKEEVKEPAK 900
  901 EVEGLKEEVK EPAKEVEGPK EEVKEPAKEV EGPKEEVKEP AKEVEGPKEE VKEPAKEVEG 960
  961 PKEEVREPTK EVEGPKEEVK EPMKEVEGSK EEVKEPTKEA EGSKEEVKEP TTEVEGSKEV1020
 1021 KEPGKEVEGS KDAINQSAVA QETNVNNQVG KEKVVENQNM KENKPAVTKQ EESKKSLGAT1080
 1081 GGQENTSTLL SGLALVLSAL SMFVFRKRLF KK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle