YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|51978130, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRISIQLGF YFLIVTLLIE SVLFVLLYYS LVNNRVNEEM TALLKRGNSH RDVLEKYFDK  60
   61 QTISHVALME SEAETTVVIT NANKDVLAKS NKINTTIKKH IEKMQTRTDH EGAIIENHWK 120
  121 TSNYICTVSP IVVDGKHEGY VYMFLGTESI EKMVNGLTIQ FIIAGVITFL LTAITIFLLS 180
  181 RLLTKPLLHM KHATEKMSKG DLSVSLTTTR NDEIGELASS IQTLANDLHY MKTERSEFLA 240
  241 SVAHELRTPL TYVRGYADIA LKESTSPEQR LRYLSIIKDE SDYITNLVQD LFSLAQMEQH 300
  301 NFSIQVKEVH LHTFLTRIVE KVNAMYKERY ITVSFSCPPT LLVNLDEQRF EQVVMNILNN 360
  361 AYRHSKEHSH INISVTEEHK RISITIEDEG EGIPSEDLPH IFDRFYRVDK ARSRATGGTG 420
  421 LGLSIVKEIV ELHGGTITVT SEVDHGSCFI ISLPSIQKHD YY

Type	Start	End	Confidence
Cytoplasmic	1	7	0.76
Transmembrane Helix	8	31	0.90
Non-Cytoplasmic	32	158	0.77
Transmembrane Helix	159	182	0.86
Cytoplasmic	183	462	0.75