YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30254421, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNKAWLYVI LTCIFEVFWV FGFNTANTWW HWIIILGVIA VDFHFLSKAC EHLATGTVYA  60
   61 VFAGAGTVGT FLMDVFLFGG SFSVGKLFFI VMVVAGVIGL KLADNKEETV EGAA

Type	Start	End	Confidence
Cytoplasmic	1	4	0.95
Transmembrane Helix	5	23	0.90
Non-Cytoplasmic	24	28	0.83
Transmembrane Helix	29	46	0.96
Cytoplasmic	47	54	0.82
Transmembrane Helix	55	77	0.88
Non-Cytoplasmic	78	83	0.69
Transmembrane Helix	84	103	0.89
Cytoplasmic	104	114	0.92