YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30261028, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVTSKTESV IVKYEGHVAT VMVNRPEVLN ALDEPTLKEL LQKLKEVAES SAHIVVLCGN  60
   61 GRGFSAGGDI KSMLSSNDES KFDGIMNTIS EVVVTLYTMP KLVISAIHGP TAGLGLSIAL 120
  121 TADYVMADIS SIIAMNFIGI ALIPDGGGHF FLQKRVGENM TKQIIWEGKK LSATEALDIG 180
  181 LIDEVIGEDF QTAVKQKISE WSQKPIKAMI QTKQILCEVN RSNLEQTLQL EKRGQYAMRQ 240
  241 TADHKEGIAA FLEKRLPAFK GE

Type	Start	End	Confidence
Cytoplasmic	1	101	0.83
Transmembrane Helix	102	122	0.71
Non-Cytoplasmic	123	131	0.67
Transmembrane Helix	132	152	0.79
Cytoplasmic	153	262	0.81