YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52144199, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKFLKVAT ALTIMGGVAF SAEGTTAKAE LAAKPQQASQ AIFKDVPAGH WSYEAIQTLA  60
   61 EQEIMLGYGN GVFGFGHNVT REQVAALIYR ALDLDEEFGE DEVLESPYND IVDDKSTMFP 120
  121 FEVLAVTELG IFTGDEKGNF RPKATLTRAE MAQVLTKAFG LKAQGTTAFK DVPKGHWAEN 180
  181 AINAVGSNGI SVGDGKGNFA PNMKVTREQY AQFLFKTIFE

Type	Start	End	Confidence
Signal Peptide	1	24	0.95
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	220	0.99