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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|52144052, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKKPFKVLS SIALTAVLGL SFGAGGQSAY AETPVNKTAT SPVDDHLIPE ERLADALKKR  60
   61 GVIDSKASET ETKKAVEKYV ENKKGENPGK EVSNGDPLTK EASDFIKKVK DAKADTKEKL 120
  121 DKPATGTPAA TGPVKGGLNG KVPTSPAKQK AYNGDVRKDK VLVLLVEYAD FKHNNIDKEP 180
  181 GYMYSEDFNK EHYEKMLFGN EPFTLDDGSK IETFKQYYEE QSGGSYTVDG TVTKWLTVPG 240
  241 KAADYGADAA SGGHDNKGPK GPRDLVKDAL KAAVDSGIDL SEFDQFDQYD VNGDGNQNQP 300
  301 DGLIDHLMII HAGVGQEAGG GKLGDDAIWS HRWTVGPKPF PIEGTQAKVP YWGGKIAAFD 360
  361 YTIEPEDGAV GVFAHEYGHD LGLPDEYDTQ YSGQGEPIEA WSVMSGGSWA GKIAGTTPTS 420
  421 FSPQNKEFFQ KTIGGNWANI VEVDYEKLNK GIGLATYLDQ SVTKSNRPGM IRVNLPDKDV 480
  481 KTIDPAFGKQ YYYSTKGDDL HTKMETPLFD LTNATTAKFD FKSLYEIEAE YDFLEVHAVT 540
  541 EDGQQTLIER LGEKANSGNA DSTNGKWIDK SYDLSQFKGK KVKLTFDYIT DGGLALNGFA 600
  601 LDNASLTVDG KVVFSDDAEG TPQLKLDGFV VSNGTEKKKH NYYVEWRNYA GADNALKFAR 660
  661 GPVFNTGMVV WYADSAYTDN WVGVHPGHGF LGVVDSHPEA IVGTLNGKPT VKSSTRFQIA 720
  721 DAAFSFDKTP AWKVVSPTRG TFTYDGLAGV PKFDDSKTYI NQQIPDAGRI LPNLGLKFEV 780
  781 VGQADDNSAG AVRLYR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle