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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|52144007, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGDIILKKK YMKALVVATT LAIPFAAYST PALAALKAEA NQSVVAASER TYATEIKIYK  60
   61 DQKDEPSMVS QYIKDPKVTI AAGKKIVTVT MQDSDYFQYL RIEDKNQPDV FHDVKVLSED 120
  121 KRKNGTKVVQ FEIDEFEKKH NMQMHILIPA IGYDHKYQVQ FEIKDPTVGN KETEKPDDNS 180
  181 NSGNTETDHP VDNQNMITDN KLRELVNKKV FNRKDLNTPI TKEELLQVKN LFLNTNEILD 240
  241 YSALKYMPNL KSLTVANAKI KDPSFFANLK QLNHLALRGN EFSDVTPLVK MDHLDSLDLS 300
  301 NNKITNVAPL IEMKNVKSLY LSGNQIEDVT VLAKMEQLDY LNLANNKITN VAPLSALKNV 360
  361 TYLTLAGNQI EDIKPLYSLP LKDLVLTRNK VKDLSGIEQM KQLEELWIGK NEIKDITPLS 420
  421 KMTQLKELHL PNNELTDITP LSSLVNLQKL DLEANYISDL TPASNLKKLV FLSFVANEIR 480
  481 DVRPVIELSK KAYINVQNQK VFLEDTEVNE EVKVPIYEKD GKISTKIRLK SEGGTYSNDA 540
  541 VKWSTPGEKV YEFGIKDPFA DTGIFFTGSV IQNVVESKAD NTSKEGNNSR EDEKVEVVEF 600
  601 KDVPKGHWSE EAINYLAKEN IFKGYGNGQF GFGDSITRGQ VASLVQRYLK LQNKAEQKER 660
  661 FTDTKGHMFE QDIATVAQAG IMQGDGTGEF RPDGVLTRYE MSVVLYKVFQ LKEDGNNKVN 720
  721 FKDVPTGHWA EGYVKALVDN NISKGDGKEH FLGDDFVTRE QYAQFLYNAI TK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle