YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30261618, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNKIYDWVD ERLDITPIWR DIADHEVPEH VNPAHHFSAF VYCFGGLTFF VTVIQILSGM  60
   61 FLTMYYVPDI KNAWESVYYL QNEVAYGQIV RGMHHWGASL VIVMMFLHTL RVFFQGAYKK 120
  121 PRELNWIVGV LIFFVMLGLG FTGYLLPWDM KALFATKVGI QIAEQTPLIG PYIKTLLAGH 180
  181 SEIVGAQTLT RFFAIHVFFL PAALLGLMAF HFIMIRKQGI SGPL

Type	Start	End	Confidence
Cytoplasmic	1	39	0.96
Transmembrane Helix	40	59	0.93
Non-Cytoplasmic	60	93	0.89
Transmembrane Helix	94	114	0.93
Cytoplasmic	115	123	0.94
Transmembrane Helix	124	146	0.92
Non-Cytoplasmic	147	191	0.96
Transmembrane Helix	192	215	0.90
Cytoplasmic	216	224	0.96