YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|51977045, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.58
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKIIITIV TLFIITVALF GTYKLMNARS FQLFGDLTNR VETNEKVIAL TFDDGPTNNV  60
   61 KQILPLLDTY NAKATFFLIG NELEKNLSLG KSIVQSGHQV GNHTYSHNRM VFKTPSFIKE 120
  121 EIEKTNSLIR RIGFTGEIDF RPPNGKKLIG LPYYLNKNNI ETITWDLEPD TFYKSAADKI 180
  181 DYVSKNVKPG SIILLHSMYD ESNENLQTIE GILDSLSKKG YQFVTVNELQ KSAK

Type	Start	End	Confidence
Cytoplasmic	1	4	0.55
Transmembrane Helix	5	22	0.53
Non-Cytoplasmic	23	234	0.96