YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52142973, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.74
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIKLVGIFT CMIVILGIFI VYTNQSIGKE PKKTNYETHE NSINREKNGT SNNIASSFAS  60
   61 VQAVVNKEYG LPEDYKPEDL VVPNVPFSFS GTLEKSYLRK EAAEALERLF DLANKEGIQL 120
  121 NAVSGFRSYD YQKKLYANNV KRKGQEHTDR FSAKPGHSEH QTGLTMDVSS KSADNELELT 180
  181 FANTKEGKWL KENAHRAGFI IRYPKGKESI TGYAYEPWHI RYVGDIAESI YKKKLTLEEY 240
  241 MNL

Type	Start	End	Confidence
Cytoplasmic	1	4	0.61
Transmembrane Helix	5	24	0.68
Non-Cytoplasmic	25	243	0.90