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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|52142777, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKRLINKSV LLLTIIVMLS SVYSFQNVKA VSNSKTTEVI IHYKEQSGNT KDWNLWIWGE  60
   61 NSNGKSYEFT GEDEFGKYAK INIDGDYNRL GFIIRTSEWE KDGGDRWIEN IKDGRAEVWI 120
  121 LSGDEKVYNS KPSSDLSIQK ATIDSFHEIT VTTNVPFHIK EKKIEMEGIK IKSISPYDIN 180
  181 SGDITNKVKI ITDQKIDLKQ TYKVKIENLA DTNTEIGKVI RTEEFDKLFY YGGNDLGNIY 240
  241 TPQHTKFRVW APTASEAKLV TYKKWNDKIG TEINMQQGEK GTWKAELKGN QKGLYYTYKV 300
  301 KIGDKWTEAV DPYARAASVN GDKGAVVDLE ETNPKRWNTN KKPKLKNPED AIIYELHVRD 360
  361 LSIQPESGIK QKGKYLGVTE KGTKGPEGVK TGLDHMKDLG VTHVQLLPIF DYASVNEEKV 420
  421 NEPQYNWGYD PKNFNVPEGS YSTNPYEPTV RITELKQMIQ TLHDNNLRVV MDVVYNHMYN 480
  481 AAESNFHKLV PGYYYRYNED GTFANGTGVG NDTASERKMM RKFMIDSVTY WAKEYNLDGF 540
  541 RFDLMGIHDY ETMNEIRKAV NQIDPSIILH GEGWDLNTPL AAELKANQKN AEKMKGIAHF 600
  601 NDNIRDGLKG SVFEEKENGF VNGKENMEDR IKKGITAGID YDTNSSTYLD PEQVLTYVEA 660
  661 HDNHTLWDKL ELTNPGDSEE ARKQMHKLSS SILLTSQGIP FLHAGQEFMR TKYGDHNSYK 720
  721 SPDSINQMDW LRRAAFNNEV DYMKGLIELR KKYPAFRMTS AEQIKTHVSF IDAPKNTVAY 780
  781 TIEGNKNEYF TVAHNANRES VEISLPSKGP WKVLVDGKQA GSKPLYVVHD NKIKVPALSS 840
  841 LVLKTEKPIK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle