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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|52142262, gi|...
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVVIKKKRT RGKKIFIWSS SIVLLLVICT AIFLNIYTLK SVPKIDGTIK LEDLQRAVTV  60
   61 KRDSKGVPHI KAENAHDLYF SQGYVQAQDR LFQMDLSRRQ ASGMLSEVVG EAAVDRDKLF 120
  121 RTLGLRRAAE ASVSQYDGEA KDALQSFADG VNAFIREAKE EKKLPVEFTI LGYEPAEWSI 180
  181 VDTLTIGKYM AFDLGGHWHG QAFRYWALKN LPKEQANELF PTYPKDAPRL LAELENTNVN 240
  241 VAQSFAKTII PPEFNGSNNW VISGEKSASG KPILADDPHL SLATPSIWYQ SKLEMKDLNV 300
  301 SGVIFAGVPG VILGHNDKIA WGVTNTGPDV QDLYIEKRNP NNENEFLYND KWEKATVVDE 360
  361 SIKVKGGKTI PYNVTVTRHG PVISEFADKG KEKTKTVFAL KWTALEPSAE LKAVLNMNKA 420
  421 KDWNEFETAL QDFHTPTQNF VFASNDGTIA YKANGNIPVR KKGDGSLPVP GWTDEYEWEG 480
  481 YIPYNQLPKV INPKQGFIST ANNKIVDDNY PYHISNTWAQ PYRQMRIQEF LQEKEKYTVK 540
  541 DLEELQMDQK NLYGKEFTPI FLKELNKVSL NEIEKEGVKQ LTKWNFYDNK DEAAPLIFHL 600
  601 LMKEISNTLF SKEIPKDVME LFEGKSQVVD ELIRKEVAGE NSAWFKKYGG FTKVVHTSYE 660
  661 NVMKKLQKEY GPDVTEWKWG DYHQLAFTHP ISKSSSVLAL LAFNREKPVP IGGSQVTVQA 720
  721 ASYGDNGIVN HGASWRFVID TKDMSNGYHI VGPGQSGHFR SDWYHDQIDD WVNGTYHTTT 780
  781 LNTDGVKGKV LTLEAK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle