YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52142253, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRKTSKVKK FLGFVLTAAL ATTTMVGTAN AQTTTNSYKV ASNENTVFTD VPKDHWSKDA  60
   61 IDYLAAAGIY KGYGNGKFGF GDNITRGQVA SLVNRHLGLI ADDKQGNMFS DITNHMFEKD 120
  121 IKAIAQAGIM TGDGTGTFRP DDVLTRYEMA VILQKAFHLE SKEQGKFKDV PKGHWAYEAV 180
  181 NTLRSNRIAQ GDEAGNFNGN TFVKREQYAQ FFYNAIAKNR DYNFNINSKE EMKQMLTTAL 240
  241 ENGTFGPFKL DVLGKDLSDV KKEYGVPDVW KKAPCTECDA PNIAVYGDYN IDMYPSDARY 300
  301 ISVKMDITIN ELKEWFGEPD GIGEDMTSEG FIYNRGSYSL YFSFSDDYIQ RAEISKNKFN 360
  361

Type	Start	End	Confidence
Signal Peptide	1	31	0.99
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	360	0.99