YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52141734, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKKFILKL FICSTIFITF VFALHEKRIV AASSVNELEN WSKWMQPIPD NIPLARISIP  60
   61 GTHDSGTFKL QNPIKQVWGM TQEYDFRYQM DHGARIFDIR GRLTDDNTIV LHHGPLYLYV 120
  121 TLHEFINEAK QFLKDNPSET IIMSLKKEYE DMKGAEGSFS NTFEKNYFVD PIFLKTEGNI 180
  181 KLGDARGKIV LLKRYGGSNE SGGYNNFYWP DNETFTTTVN HNVNVTVQDK YKVGYDEKVK 240
  241 SIKDTINETM NNSEDLHHLY INFASLSSGG TAWNSPYYYA SYINPEIANY IKQKSPTRVG 300
  301 WIIQDYINEK WSPLLYQEVI RANKSLIRD

Type	Start	End	Confidence
Signal Peptide	1	23	0.93
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	329	0.99