YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30258919, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.37
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKVLLVNGP NLNRLGVREV NVYGKGTLAT LEADMKQEAE AMGVELECFQ SNHEGAIIDR  60
   61 IHEAEDIYEG IILNPGAFTH YSYAIRDAIA SISIPVIEVH ISNIHQRESF RHESVTAAVC 120
  121 AGQIVGFGFY GYKLALFALM EKLREA

Type	Start	End	Confidence
Non-Cytoplasmic	1	114	0.59
Transmembrane Helix	115	136	0.65
Cytoplasmic	137	146	0.37