YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30264372, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKGKLIDSF GYAIVGIFFC LRHERNMKIH YLAAVIVLCC GFYFHITKVE WMILLIVIGI  60
   61 VMSLEMVNTA VEKTVDLATT DIHPFAKVAK DVAAGAVLLF AIIAVIIGAI IFLPYVV

Type	Start	End	Confidence
Cytoplasmic	1	28	0.86
Transmembrane Helix	29	46	0.97
Non-Cytoplasmic	47	51	0.78
Transmembrane Helix	52	71	0.88
Cytoplasmic	72	91	0.85
Transmembrane Helix	92	113	0.96
Non-Cytoplasmic	114	117	0.68