YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|51974648, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGQWGYVAI SFIIGIAIAF SSSVVLLTCC LVLYVFFCLY RTSRKTFLYC MIVCFSGAMY  60
   61 TTYVQGQNKP LGESYEATRG VIYNTPLING DRLSFQVEDQ NKNIVQLSYK IKSASEKKQM 120
  121 RQLHAGVSCI FDGERKEPQI ARNFHGFNYR DYLYKQNIHF ILEATYISGC RKTSLSLVQW 180
  181 ILLLRQQAIL GVTEMFPEQS GAFMNALLFG DRQQMTFEVE EQYQQFGLVH LLAISGSHIV 240
  241 LLMVIVYFIL LRSGVTREIA TVCLIFFIPI YMILAGASPS VMRASITGVL MLIAFMCSIR 300
  301 LSSLDALSIT AICMLIFDPY LVFNIGFQFS FVGSFALLLS APLLLESGNG VIRNSIYISL 360
  361 ISQLVSTPIL LYHFGYYSPY SIFLNILYVP FLSLIVLPCS IIILICMPII PFLAKSFANV 420
  421 LSIGLNLSND FLSYCESLPF TRLNFGQTPI LLVALYCVSI ISVLMVWERR ISKGMMFIFA 480
  481 GIFLFISTGH YVYPYFRESG SVTFLDVGQG DAILIRLPYD QEIYLIDTGG TIRLNKEEWQ 540
  541 RKKHEFSVGN DILIPYLQKE GIKKIDKLIV THGDTDHIGA AQELLSNITV KEVVFGRKEQ 600
  601 EAILEKAVKK QALEKEVKIS EVGKGESWRV NEAEFFVLAP TGKERSENNA SIVLWAKLGG 660
  661 ITWLFTGDLE EGGEKGLVAT YPDLRADVLK VAHHGSNTSS IMPFLNAVQP NIAIISVGER 720
  721 NRYGHPHKEV IERFEKMGIE IWRTDKQGAI SYVFKEERGT FRSKITYDET RNR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle