YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|51974174, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFKKLILTG ALVATTAFTS IGTAQASADF KDVPNNHWSY KAIMDLANKN VVAGYGNGIF  60
   61 GFGDDVTREQ VAALMFRQLK PIVKEQYNNP YKDVTDRSTR FKKEILALTE MGVFAGDDKG 120
  121 NFRPKDSLTR DEMAQILTKG FKLQIRGDHN FPDVDRNGWA NPAITAVKSN YITAGTGDGT 180
  181 FAPRMHVSRE QYVQFLYNAT LPLEERPGAK QPQPQPKPEV KPEVKPEVKP DPKRFANCKE 240
  241 ANDAGYYDIT RDSPYYGKHL DRDGDGIACE KKKKGK

Type	Start	End	Confidence
Signal Peptide	1	26	0.99
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	276	0.99