YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52140652, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKWVFISFF IACTICVGVY ISPLFQKEID VKIGQENGAV KNVNMEKIEV TKEQIYKGDL  60
   61 LLVNKDYPVR KDSIRSDIIN VNHNSELVRG YVIFDRNLRL SKDVVKKFLN VVDAAGKDGV 120
  121 QHFLMNSGYR DFQEQRQLYE KMGSDYALPA GYSEHNLGLS LDVGSTQKKM EKAPEGKWIE 180
  181 ENVWKHGFVL RYPKNKSNIT GIQYEPWHIR YVGVPHSAIM QKKKITLEEY LDFLKEEKEI 240
  241 TTDVEGTKYT VSYYKVSGDM KVNVPANKQY EISGNNMDGV IVTVQE

Type	Start	End	Confidence
Signal Peptide	1	18	0.73
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	286	0.97