YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30265054, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRTIVMIVM IATLFTGMIF FSYAQRQQAV RADQPSITGQ YGITIDADTG EILYGKREDE  60
   61 RSYPASIAKM MTTLLLLENV KEDEEITVTE NAIKTESQSK KIKLRAGEKL KRDEALKLML 120
  121 IISADPIAES IAEHIAGSKN EFVKMMNARA KELGTKHATF KNASGADALG NKVSPYDIAM 180
  181 ITKEALKYPV VLEYMNSTRT TLHTSERSPN IANYGREELY DDPYAIGSKS GLSALGKYTV 240
  241 VTVDEKDGKR VINVVLSSTR KQLYPDTKKM AHYAFQQLK

Type	Start	End	Confidence
Signal Peptide	1	24	0.77
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	279	0.99