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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|51973986, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRKMVGKWF SFLSALIILL GIAMPQVKAE VMNRETYKMD WSYSNSKQRE IKTEIIKTAS  60
   61 GSIAYCLTPD LRSPNGDDLP EMGKTSDAVY RVLLNGYPQK GPSELGVATT EEAHYATQLA 120
  121 VWIAANELTE EDLVAKNERV HNLMKRLVEA SKKETGLQDV FFKVNPVDSQ TATQKGDYLE 180
  181 TGFYAVQTNA VSGSYTILPE NAPKGLRIVN ENGEEKSTLL INEKFKILIP KNTSSGNFKM 240
  241 KVKSTLTNLQ AIAFKGSEKV QNTTVLLQRN SEKISTDLVV NWESVGSLKI MKLGEKKEVL 300
  301 KGAVFEVSNE NFKQNVTTND KGIAELGNLP IGIYSVKEIQ APAGYVLDGS VKKIEVKTGE 360
  361 TAVVELKNEN VKGELEITKV DVADGNTKLP NAEFTIYNEQ GKEVVKGKTN EQGIAKFKLP 420
  421 YGKYKYKETI APNGYVINEE TFAFEIKENG EIIKHIVQDK KVEGELEITK VDVADGNTKL 480
  481 PNAEFTIYNE QGKEVIKGKT DEKGVAKFKL PYGKYKYKET IAPNGYVINE ETFAFEIKEN 540
  541 GEIIKHIVQD KKVEGELEIT KVDVADGNTK LPNAEFTIYN EQGKEVVKGK TNEQGIAKFK 600
  601 LPYGKYTYKE TIAPNGYVIN EETFAFEIKE DGEIIKHIVG NKKEEKASLP SKPNKPTPNG 660
  661 EVKPSADVKP VQQHNTHNEV RLPATGGVSN EFTSLFVLGI SFIIAGAYVL RMKNRKEM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle